voxtox.data package

Submodules

• voxtox.data.djn_253 module
• voxtox.data.jes_109 module

Module contents

Package providing lists of datasets with outlining for VoxTox.

voxtox.data.get_paths(topdir='.', samples=None, pattern='VT1_*', ids=None)

Retrieve full paths to patient folders, optionally matching on ids.

Parameters: topdir - str, default=’.’

Top-level data directory.

samples - list, default=None

List of topdir sub-directories to be searched for patient data.

pattern - str, default=’VT1_*’

Pattern to be matched to identify patient folders.

ids - list, default=None

List of patient identifiers. Ignored if None.

voxtox.data.get_paths_djn_253(top_dir)

Retrieve full paths to datasets with planning scans outlined by DJN.

voxtox.data.get_paths_jes_109(top_dir)

Retrieve full paths to datasets with planning scans outlined by JES.